Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015953974.1_cds_XP_016492933.1_83094
CDS Infomation

[gene=LOC107812379] [db_xref=GeneID:107812379] [protein=aspartic proteinase Asp1-like] [protein_id=XP_016492933.1] [location=complement(17653..18954)] [gbkey=CDS]
Sequence

ATGGGGGGAGGAAAAATTATTGGGATGGTGATATTTGTGGCTGTGTCTGTGGCTGTATCA
GCAGCAGCAGGTTATGGTGATAATCAGCAGCTGCAGCAGCAGCAGAAATGGTGGAAATGG
ATGTCTTCTGGTTCTGCAGCGTCTTCATCAGTGGTCAAACCAGTTGTCTCTTCTTCAATT
GTCCTACCACTCTATGGTAATATCTATCCCATTGGTTATTACTATGTTCAGCTCAATATA
GGACAGCCTTCAAAGCCCTATTTTCTTGATCCTGACACCGGCAGTGATCTCACATGGCTG
CAATGTGATGCTCCCTGTGTTCGCTGCACAAGAGCGCCTCATCCATTCTACAAACCAAAC
AATGACCTCGTGCCGTGCAAGGACCCCCTCTGTGCCTCCTTGCATCATGTTGATTACAAA
TGTGAGAGTCCAGAACAATGTGACTATCAGGTTGACTATGCTGATGGCGGTTCATCGCTA
GGTGTCCTACTTAATGATGTGTTTCACTTCAACGGGACAAGTGGTGCTCGGATAATACCT
CGTTTGGCTCTAGGGTGTGGATATGATCAGTTACCTGGTCAATCTCATCATCCTTTAGAT
GGAGTGCTTGGCCTTGGAAAAGGAAAAGCGAGCATTGTGTCCCAGCTTCACAGCAAGGGT
CTGGTGCGGAATGTGGTAGGCCATTGCTTGAGTGGCAGAGGAGGAGGTTTTCTCTTCTTT
GGAGATGAGGTTTATGATTCCTCACGCATTGTCTGGACTCCTATGGCGCACGATCGCATG
AAGCACTATTCAGCAGGATCTGGAGAACTCATATTTGGTGGTAAAGCCACAGGATTCAAG
AACCTTTTTGTAGTCTTTGACAGTGGAAGTTCCTTCAGCTACCTAAACTCACAAACATAC
CAAGGCTTCATTTCATTGTTGAAAAAAGAACTGAATGGGAAGCCACTAAAAGAAGCAAAG
GATGACTATACACTCCCATTGTGCTGGAAGGGCAGGAGACCTTTCAAAACCATAAATGAT
GTGAAGAAATACTTCAAGAACTTCGTACTTAGCTTTCCCCATGGATGGAAATCCAAAGCT
CATTTCGAAATTCCCCCTGAATCATATCTTATTATCTCATCAAAGGGCAGTGTCTGCTTG
GGGGTTCTAAATGGTACTGAAGCCGGCCTGCAAAATGTCAACCTTATTGGAGATATATCA
ATGCAAGATAAAATGGTGATCTATGACAATGAGAAGCAAGCAATAGGTTGGAGCCCAGCA
AATTGTGACCGGCCACCAAAGTCGAATAACATGATAATGTAA

Peptide Sequence

PEP ID

XP_016492933.1
PEP Infomation

PREDICTED: aspartic proteinase Asp1-like [Nicotiana tabacum]
Sequence

MGGGKIIGMVIFVAVSVAVSAAAGYGDNQQLQQQQKWWKWMSSGSAASSSVVKPVVSSSI
VLPLYGNIYPIGYYYVQLNIGQPSKPYFLDPDTGSDLTWLQCDAPCVRCTRAPHPFYKPN
NDLVPCKDPLCASLHHVDYKCESPEQCDYQVDYADGGSSLGVLLNDVFHFNGTSGARIIP
RLALGCGYDQLPGQSHHPLDGVLGLGKGKASIVSQLHSKGLVRNVVGHCLSGRGGGFLFF
GDEVYDSSRIVWTPMAHDRMKHYSAGSGELIFGGKATGFKNLFVVFDSGSSFSYLNSQTY
QGFISLLKKELNGKPLKEAKDDYTLPLCWKGRRPFKTINDVKKYFKNFVLSFPHGWKSKA
HFEIPPESYLIISSKGSVCLGVLNGTEAGLQNVNLIGDISMQDKMVIYDNEKQAIGWSPA
NCDRPPKSNNMIM

Transcript Sequence

Gene sequence data has not been registered.